Transforming Molecules in Enzyme Reactions.

 

I want to find enzyme transformations acting on a source molecule

I want to find a path between source and target molecules using enzyme transformations

 

If you find Transform-MinER useful please use the following citation:

Jonathan D Tyzack, Antonio J M Ribeiro, Neera Borkakoti, Janet M Thornton; Transform-MinER: transforming molecules in enzyme reactions, Bioinformatics, Volume 34, Issue 20, 15 October 2018, Pages 3597–3599, https://doi.org/10.1093/bioinformatics/bty394

Jonathan D Tyzack, Antonio J M Ribeiro, Neera Borkakoti, Janet M Thornton; Exploring chemical biosynthetic design space with Transform-MinER, Volume 8, Issue 11, 25 October 2019, Pages 2494–2506, https://doi.org/10.1021/acssynbio.9b00105