Figure 6 - full size

 

Figure 6.
Fig. 6. Scheme of principal steps in the sequence of reactions catalyzed by Fpg, showing catalytically important amino acid residues. Nucleophilic attack at C1' and protonation at O4' (a) lead to base displacement and deoxyribose ring opening. A Schiff base involving Pro-1 is formed with O4' stabilized by hydrogen bonding to Glu-2. b, following abstraction of the 2' proton of deoxyribose by a general base, Lys-56 protonates the 3'-phosphate leading to -elimination (c). Deprotonation of C4', now vinilogous to C1', is followed by protonation of the 5'-phosphate by Arg-258 and the second -elimination event (c).

The above figure is reprinted by permission from the ASBMB: J Biol Chem (2002, 277, 19811-19816) copyright 2002.