Figure 5 - full size

 

Figure 5.
Key structural elements of caspase-1 dimer stabilization. A, schematic representation of caspase-1 zymogen (left, PDB code 3E4C) and processed ligand-free caspase-1 (right, PDB code 1SC1 (42)). The proenzyme shows a well defined α-helix near the putative N terminus of the p10. This element contains cleavage Site 2, which is the critical processing site for caspase-1 activation. Once proteolysis occurs at Asp^316, the newly formed p20 C terminus and p10 N terminus are able to form anti-parallel β-sheets in the active enzyme. The important secondary structural elements are indicated with red circles. B, diagram of the backbone atoms of residues 314-321. Brackets indicate backbone interactions in the α-helix in the proenzyme structure. Two of the three hydrogen bonds in the helix are severed upon proteolysis at Asp^316, indicated with an arrow.

The above figure is reprinted from an Open Access publication published by the ASBMB: J Biol Chem (2009, 284, 6546-6553) copyright 2009.