Figure 5 - full size

 

Figure 5.
Figure 5. A close-up stereoview of the active site (the S39A-H(R3HB)[3]M complex). Side-chains of catalytic residues and residues forming the substrate-binding site in the crevice are represented as ball-and-stick models. The amide nitrogen atoms of Ser40, Cys250, and Asn302 are also shown. A model of the R3HB trimer (designated as (R3HB)[3]) is also shown as a black ball-and-stick model. A hydrogen bond between Nd1 atom of Trp307 and the carbonyl oxygen of an ester linkage adjacent to a scissile linkage, and one between His155 and Asp121 are indicated as green lines. The side-chain of Ser39 of the wild-type protein (shown in red) is superimposed on Ala39 of the mutant model, and a hydrogen bond between the Og atom of Ser39 and the amide group of Ser40 is tentatively indicated with a green broken line.

The above figure is reprinted by permission from Elsevier: J Mol Biol (2006, 356, 993-0) copyright 2006.