Figure 5 - full size

 

Figure 5.
Figure 5. (a) Conformational state surrounding residue 8 in different mutants and native BmK M1. Residues around position 8 including 8-12 and 63-64 are space-filled and coloured according to their chemical nature and locations (carbon atoms of residues 8-11 and residue 64 are green and cyan, respectively; nitrogen and oxygen atoms of these residues are in blue and red, respectively; two cysteine residues 12 and 63 are yellow). Broken lines with different colours highlight the surface of residue 8 (positive, blue; negative, red; neutral, green). (b) Distinct structures of the five-residue reverse turn (RT) in association with the C-tail (CT) of the mutants containing trans peptide bond 9-10 (K8D and K8D/P9S) and cis peptide bond 9-10 (K8Q, K8A and K8G). In the trans-containing form, the peptide group NH10 is situated inside the turn and residue 8 must be Asp, which interact with each other via hydrogen bond N10...Od1 8. There is no contact between the NH10 group and the C-terminal residue, referred to as transRT-freeCT. In cis-containing form group NH10 points out of the reverse turn and interacts with the C-terminal residue via hydrogen bond N10...O64, referred to as cisRT-bondCT. The side-chain of H10 is not shown.

The above figure is reprinted by permission from Elsevier: J Mol Biol (2005, 353, 788-803) copyright 2005.