Figure 4 - full size

 

Figure 4.
Copper-resistance and U4-cs1 suppression analyses of various β-finger mutations. (A) All β-finger mutations grow similarly to the WT at 30°C, 18°C, and 37°C. Only one concentration point in the serial dilution is shown. (B) Copper-resistance assay indicates that V1860D, T1865K, A1871E, and T1872E grow worse than the WT in both the BSG and UuG reporters at 0.05 mM Cu^++ concentration, characteristic of first-step alleles. Mutant H1863E grows better than the WT in both the BSG and UuG reporters at 0.2 mM Cu^++ concentration, characteristic of second-step alleles. V1862D behaves similarly to the WT and does not demonstrate a clear first- or second-step allele phenotype. Known first-step allele R1753K and second-step allele prp8–162 (V1870N) are used as positive controls and labeled with +. (C) Primer extension experiment indicates that V1860D, T1865K, A1871E, and T1872E are first-step alleles, which demonstrate increased lariat intermediate, reduced mRNA product, and reduced second-step efficiency compared with the WT. H1863E is a second-step allele, which demonstrates decreased lariat intermediate, increased mRNA product, and increased second-step efficiency compared to the WT. V1862D is neither a clear first- nor second-step allele. R1753K and prp8–162 (V1870N) are used as positive controls for first and second-step alleles, and the corresponding lanes are labeled with +. pBR322 DNA digested with MspI is used as a molecular weight marker. (D) V1860D (positive control, designated with +) but no other β-finger mutants tested suppress the U4-cs1 phenotype at 18°C. Only one concentration point in the serial dilution is shown.