Figure 4 - full size

 

Figure 4.
Fig. 4. Ammonium recruitment site and substrate channel. presumably forms a hydrogen bond to the side chain of S208 on the extracellular side of Amt-1 (at the top), stabilized by a interaction with the side chain of W137. The hydrophobic channel leading to the cytoplasmic side is blocked by F96 and F204, with the latter having significantly elevated B factors, an indication of structural flexibility. The N[ ]atoms of two conserved histidine residues, H157 and H305, are in hydrogen-bonding distance and their imidazole rings are almost perfectly coplanar.