Figure 4 - full size

 

Figure 4.
Figure 4. Gain-of-interaction in Zn -H46R SOD1 giving rise to water-filled helical filaments. (a) One-half of the helical Zn -H46R filament, shown in i and ii, is represented by the two dimers shown from top to bottom in green and gold. Image ii is related to the left half of iii by a rotation of 90°. A schematic diagram of the tubular filament is shown in iv. In iii, the approximate location of the crystallographic two-fold axis that runs along the diagonal in the tetragonal unit cell is indicated by a black line without arrows and a 180° rotation symbol. Application of this two-fold operator generates one complete turn of the helical filament. The double-headed black arrow indicates the diameter of the helical filament, and the blue arrow indicates the diameter of the central cavity. The GOI interface between Zn -H46R dimers is boxed. In iii, -strands 1, 2, 3 and 6, which form one-half of each SOD1 -barrel, are shown in red. The zinc loop forms a short -strand (blue) that reciprocally adds to this -sheet in neighboring Zn -H46R dimers, stabilizing the GOI interface. Zinc ions are shown as purple spheres. (b) Stereo view of the GOI interface in the Zn -H46R helical filament. Residues 78 -81 of the zinc loop from one Zn -H46R dimer (orange) interact with an exposed edge of a -strand in a neighboring Zn -H46R dimer (green) in the crystal and vice versa. Zinc ions are represented as purple spheres. The 2.15 Å [A]^55-weighted electron density, with coefficients 2mF[o] - DF[c], is contoured at 1.0 . Water molecules have been omitted for clarity. (c) Stereo view of two turns of the helical filament generated by repetition of the GOIs in the Zn -H46R structure. This view of the helical filament is rotated 90° around a horizontal axis relative to images iii and vi of panel a. Successive Zn -H46R dimers (green, yellow, blue and red) comprise one turn of the helical filament with a pitch of 35 Å.

The above figure is reprinted by permission from Macmillan Publishers Ltd: Nat Struct Biol (2003, 10, 461-467) copyright 2003.