Figure 3 - full size

 

Figure 3.
Enzyme interactions with the Ala quinonoid intermediate in the closed (A) and open (B) active sites. Stereo views with structures of quinonoid and two water molecules superposed with the corresponding weighted |F[o]| - |F[c]| electron density omit maps (green) are contoured at the 3.0σ level. Hydrogen bonds are denoted by dashed lines. Carbon atoms of residues belonging to the large rigid region are shown in orange, those from the small rigid region are shown in pink, and the residues from the neighboring subunit are shown in blue and labeled with a star. The alternate conformations of Thr-124, Thr-216, Met-288, and Phe-449 in the open conformation are shown in corresponding pale tones.

The above figure is reprinted from an Open Access publication published by the ASBMB: J Biol Chem (2008, 283, 29206-29214) copyright 2008.