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Figure 3.
Figure 3 Molecular recognition of UGCAUGU by the RBD of Fox-1.
Close-up views of the RNA binding interface of the overlay of
the final 30 structures superposed on the heavy atoms of the
structured parts of the protein and of the RNA (left), single
structures showing the intermolecular and intra-RNA interactions
that are most commonly observed in the 30 structures (middle;
see Supplementary Table SI) and schematic representations of the
hydrogen bonding interactions that are most commonly observed in
the 30 structures (right). The ribbon representation of the
protein backbone is shown in grey, side chains of the protein
are in green and the RNA is in yellow. Recognition of U[1] and
C[3] (A), of G[2] and A[4] (B), of U[5] (C), and of G[6] and
U[7] (D). Figures were generated with MOLMOL (Koradi et al,
1996).
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