Figure 2 - full size

 

Figure 2.
Illustration of some possible folds of the [beta]-sheet domain as a result of the insertion L30c. The inserted sequence (red) contains Strand II and Turn T-2. (A) In the simplest scenario, the inserted structure loops out at the insertion site, i.e., at Turn T-1. The neighboring structure retains the native conformation, leaving the identical parent sequence (yellow) unchanged. (B) In a second scenario, the insert sequence displaces the identical parent sequence, forcing it to loop out at Turn T-2. (C) In yet another scenario (the one that is observed), the sequence that is displaced in B continues so as to displace the sequence in Strand III. The structure will then be forced to loop out at T-3. In going from scenario B to C, the wild-type turn structure T-2 (Gly-Ile-Gly) is restored. In contrast, however, Strand II now replaces Strand III, causing substitutions in this region.

The above figure is reprinted from an Open Access publication published by the Protein Society: Protein Sci (2006, 15, 1085-1092) copyright 2006.