Figure 2 - full size

 

Figure 2.
Fig. 2. High-quality NMR solution structures of target proteins are displayed in the order of Table 1. For each structure, a ribbon drawing is shown on the left. -Helices are enumerated with roman numerals, and -strands are indicated with letters (for sequence locations of the regular secondary structure elements, see footnote of Table 1). The N and C termini of the polypeptide chains are labeled with N and C. On the right, a "sausage" representation of the backboneis shown for which a spline function was drawn through the C^ positions and where the thickness of the cylindrical rod is proportional to the mean of the global displacements of the 20 DYANA conformers calculated after superposition of the backbone heavy atoms N, C^ , and C' of the regular secondary structure elements for minimal rmsd. Hence, the thickness reflects the precision achieved for the determination of the polypeptide backbone conformation. A superposition of the best-defined side chains having the lowest global displacement for the side-chain heavy atoms also are shown (best third of all residues; for residue numbers, see footnote of Table 1) to indicate precision of the determination of side-chain conformations. Helices are shown in red, the -stands are depicted in cyan, other polypeptide segments are displayed in gray, and the side chains of the molecular core are shown in blue. The figure was generated by using the program MOLMOL (37).