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Figure 2.
FIG. 2. Overall fold and quaternary structure. A, ribbon
representation of the UMPKeco monomer fold (using the
UMP-containing complex). -strands (yellow) and
helices (blue, except 3, pink) are numbered.
A stick model of UMP is shown in magenta. The cross-talk loop
(green) is labeled CT. The loops are smoothed for clarity. A
gray line connects residues that delimit a segment in which no
clear density can be seen. B, the dimer constituted by the two
molecules of an asymmetric unit. View along the
non-crystallographic two-fold axis (indicated by a black ellipse
symbol). The blue subunit orientation is close to that in panel
A. C, ribbon representation of the hexamer viewed along the
three-fold crystallographic axis (indicated by a black
triangle). A particular color is used for each subunit. For the
blue and green dimer, 3 helices are pink.
Corey-Pauling-Koltun space-filling models of UMP are magenta.
The three non-crystallographic two-fold axes are shown by dotted
lines; they are perpendicular to the three-fold axis. D,
magnification of the dimer-dimer interface emphasizing the 2
residues (shown in sticks and labeled) from the cross-talk loop
that interact both with their homologues from the facing dimer
and with UMP (stick model with carbon atoms in magenta).
Hydrogen bonds are shown as red dots. -helices are
transparized for clarity. The figure was drawn with PyMOL,
Version 0.97 (38).
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