Figure 2 - full size

 

Figure 2.
Fig. 2. Positioning of the inhibitor in the active site and hydrogen-bond network. One of the inhibitor hydroxyls has extensive contacts with the catalytic Asp25/Asp125. The hydrogen-bond distances are short (2.7–2.8 Å). The gauche hydroxy group is hydrogen-bonded to one of the catalytic aspartate residues. Gly27/Gly127 contribute to the active-site hydrogen-bond network by donation of hydrogens via the main-chain amide groups. These two compounds 1 and 2 represent the two groups of inhibitors in this study. Compound 1 (A) has 10 and compound 2 (B) has 8 hydrogen-bond donors/acceptors. In the latter case, two water molecules remain co-ordinated to the G48/G148 carbonyl groups after complex formation.

The above figure is reprinted by permission from the Federation of European Biochemical Societies: Eur J Biochem (2003, 270, 1746-1758) copyright 2003.