Figure 1 - full size

 

Figure 1.
Figure 1. MART-1[26/27–35]-based peptides adopt one of two general conformations in the HLA-A2 peptide-binding groove. (a) Superimposition of the native AAG nonamer and the P2-modified ALG nonamer solved here and by Sliz et al.,^24 identifying the extended conformation. (b) Superimposition of the native EAA decamer, the P2-modified ELA decamer solved by Sliz et al., and the P1-modified LAG nonamer, identifying the bulged conformation. (c) Stereo image comparing the extended conformation of the native AAG nonamer and the bulged conformation of the ELA decamer. (d) Same as in (c), but rotated 90° out and showing the surface of HLA-A2 as partially transparent. All superimpositions are via the backbones of P1 and P6−P9.

The above figure is reprinted from an Open Access publication published by Elsevier: J Mol Biol (2007, 372, 1123-1136) copyright 2007.