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PDBsum entry 9v7i

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Pore analysis for: 9v7i calculated with MOLE 2.0 PDB id
9v7i
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.49 1.92 86.1 -1.53 -0.37 20.2 82 7 7 6 3 4 1 1  CYC 202 J
2 1.47 2.33 86.4 -1.49 -0.33 14.4 83 6 6 14 3 7 1 0  
3 1.43 2.41 86.6 -1.31 -0.28 13.2 83 6 6 14 3 7 1 0  
4 2.26 2.27 94.5 -1.46 -0.46 21.3 84 10 11 8 6 3 0 0  
5 2.01 2.25 108.9 -2.27 -0.52 29.2 83 13 12 9 10 4 0 0  CYC 201 O
6 1.38 2.07 111.6 -1.70 -0.60 16.1 91 6 2 7 2 0 1 1  CYC 202 W
7 1.59 1.72 124.3 -1.64 -0.67 17.6 89 9 13 18 10 2 1 0  
8 2.42 2.98 129.3 -2.43 -0.66 25.2 86 13 9 11 3 1 1 0  CYC 201 V
9 1.42 1.48 134.8 -1.25 -0.27 16.2 83 10 8 11 12 5 2 1  CYC 201 X
10 1.47 2.39 139.0 -2.54 -0.67 23.6 87 12 12 16 3 2 1 0  
11 2.20 2.23 142.8 -1.80 -0.68 19.4 88 11 14 15 12 2 1 0  
12 2.08 2.51 147.4 -2.22 -0.65 25.1 86 17 19 20 9 5 0 0  
13 1.61 2.01 150.8 -1.25 -0.21 17.0 84 14 8 9 16 5 2 1  CYC 201 X CYC 201 Y
14 1.52 1.95 152.4 -1.50 -0.45 18.1 87 14 13 14 14 3 3 1  CYC 202 W
15 1.64 1.64 155.4 -2.09 -0.60 23.0 85 15 18 18 7 4 1 1  CYC 202 H
16 2.20 4.01 152.9 -1.47 -0.34 17.2 85 13 8 15 6 6 1 0  CYC 201 V
17 1.43 2.41 154.8 -2.09 -0.51 21.2 90 11 7 13 5 1 2 0  CYC 201 V
18 1.24 1.44 159.4 -1.26 -0.31 18.6 86 15 10 13 18 5 0 1  CYC 201 X
19 1.49 1.97 175.7 -1.44 -0.42 16.7 86 14 13 15 15 4 4 2  CYC 202 S CYC 202 W
20 1.53 2.00 173.2 -1.56 -0.39 21.5 85 18 13 16 17 5 0 1  CYC 201 X
21 1.56 2.02 182.7 -1.24 -0.29 17.5 86 15 11 14 19 6 1 2  CYC 202 S CYC 201 X
22 1.62 1.84 178.3 -1.78 -0.54 21.9 87 19 16 19 14 3 1 1  CYC 202 S
23 1.11 0.97 185.5 -1.44 -0.37 17.8 87 14 17 22 20 5 2 1  CYC 202 L CYC 202 S
24 2.16 2.32 186.7 -2.51 -0.69 28.6 86 18 19 19 9 3 0 0  
25 1.26 1.50 197.2 -1.62 -0.41 20.8 84 21 15 16 18 6 0 1  CYC 201 H CYC 201 X
26 1.42 2.31 195.7 -2.11 -0.45 24.6 85 20 16 17 14 4 1 0  CYC 201 O
27 1.45 1.73 206.6 -1.20 -0.30 18.2 84 19 14 14 18 6 2 1  CYC 201 X
28 1.48 1.50 229.2 -1.21 -0.30 19.3 86 21 16 17 26 5 2 1  CYC 201 X
29 1.57 1.55 269.8 -1.49 -0.36 20.1 86 26 15 21 24 4 1 1  CYC 201 V CYC 201 X
30 1.57 1.55 286.4 -1.54 -0.37 20.5 87 24 14 19 24 5 1 1  CYC 201 C CYC 201 X

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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