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PDBsum entry 9uo2
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Tunnel analysis for: 9uo2 calculated with  MOLE 2.0
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PDB id
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9uo2
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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2 tunnels,
coloured by tunnel radius |
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19 tunnels,
coloured by
tunnel radius
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19 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.24 |
1.53 |
17.4 |
-0.89 |
-0.14 |
7.9 |
93 |
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1 |
0 |
2 |
2 |
1 |
0 |
0 |
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CLR 407 C
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2 |
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2.05 |
2.22 |
29.6 |
2.16 |
0.55 |
0.8 |
83 |
0 |
0 |
1 |
12 |
2 |
0 |
0 |
76F 401 A 76F 402 A CLR 429 A 76F 403 C LPE 406 C
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3 |
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2.05 |
2.21 |
30.4 |
2.32 |
0.62 |
0.8 |
84 |
0 |
0 |
2 |
11 |
2 |
0 |
0 |
76F 401 A LPE 404 A CLR 402 C 76F 403 C 76F 404 C
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4 |
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1.50 |
1.64 |
31.5 |
2.02 |
0.48 |
0.9 |
81 |
0 |
0 |
1 |
12 |
3 |
0 |
0 |
76F 401 A 76F 402 A CLR 429 A 76F 403 C LPE 406 C
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5 |
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1.48 |
1.63 |
31.5 |
1.98 |
0.45 |
0.9 |
81 |
0 |
0 |
1 |
12 |
3 |
0 |
0 |
76F 401 A LPE 404 A CLR 402 C 76F 403 C 76F 404 C
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6 |
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1.49 |
1.63 |
32.3 |
2.27 |
0.59 |
0.7 |
82 |
0 |
0 |
2 |
11 |
3 |
0 |
0 |
76F 401 A LPE 404 A CLR 402 C 76F 403 C 76F 404 C
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7 |
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1.47 |
1.62 |
32.4 |
2.27 |
0.59 |
0.7 |
82 |
0 |
0 |
2 |
11 |
3 |
0 |
0 |
76F 401 A 76F 402 A CLR 429 A 76F 403 C LPE 406 C
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8 |
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1.24 |
1.55 |
37.4 |
-1.62 |
-0.30 |
17.5 |
86 |
4 |
3 |
5 |
3 |
1 |
2 |
0 |
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9 |
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1.15 |
2.14 |
41.9 |
1.15 |
0.29 |
2.1 |
80 |
1 |
0 |
2 |
12 |
3 |
0 |
0 |
76F 401 A 76F 403 C CLR 407 C
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10 |
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1.24 |
1.53 |
43.1 |
-1.36 |
-0.25 |
13.4 |
89 |
3 |
3 |
7 |
4 |
1 |
2 |
0 |
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11 |
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1.16 |
2.13 |
43.5 |
1.17 |
0.28 |
1.7 |
79 |
1 |
0 |
2 |
12 |
4 |
0 |
0 |
76F 401 A CLR 405 A
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12 |
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1.15 |
2.13 |
43.8 |
1.01 |
0.24 |
2.1 |
79 |
1 |
0 |
2 |
12 |
4 |
0 |
0 |
76F 401 A 76F 403 C CLR 407 C
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13 |
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1.16 |
2.21 |
45.4 |
1.58 |
0.46 |
1.6 |
84 |
1 |
0 |
3 |
14 |
3 |
0 |
0 |
76F 401 A CLR 405 A 76F 403 C
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14 |
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1.18 |
1.94 |
47.3 |
1.48 |
0.43 |
1.7 |
83 |
1 |
0 |
3 |
14 |
4 |
0 |
0 |
76F 401 A CLR 405 A 76F 403 C
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15 |
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1.17 |
1.94 |
47.6 |
1.42 |
0.41 |
2.0 |
83 |
1 |
0 |
3 |
14 |
4 |
0 |
0 |
76F 401 A 76F 403 C CLR 407 C
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16 |
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1.24 |
1.52 |
47.9 |
-0.95 |
-0.32 |
8.4 |
89 |
2 |
1 |
9 |
6 |
1 |
5 |
0 |
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17 |
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1.97 |
3.86 |
49.0 |
0.75 |
0.58 |
9.9 |
73 |
5 |
2 |
1 |
13 |
5 |
1 |
0 |
76F 401 A 76F 402 A 76F 403 C
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18 |
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1.45 |
1.62 |
50.9 |
0.60 |
0.54 |
10.6 |
72 |
5 |
2 |
1 |
13 |
6 |
1 |
0 |
76F 401 A 76F 402 A 76F 403 C
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19 |
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1.46 |
1.63 |
51.0 |
0.52 |
0.53 |
11.2 |
72 |
5 |
2 |
1 |
13 |
6 |
1 |
0 |
76F 401 A 76F 402 A 76F 403 C
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program