spacer
spacer

PDBsum entry 9r6y

Go to PDB code: 
Top Page protein ligands tunnels links
Tunnel analysis for: 9r6y calculated with MOLE 2.0 PDB id
9r6y
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
0 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.26 1.26 17.1 2.60 0.99 1.1 78 0 0 1 5 2 0 1  EDO 801 A
2 1.21 1.21 18.6 2.28 0.89 1.2 81 0 0 1 6 2 0 1  EDO 801 A
3 1.25 1.25 26.9 2.17 0.82 1.2 82 0 0 1 6 2 0 1  EDO 801 A EDO 804 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer