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PDBsum entry 9ofh
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Pore analysis for: 9ofh calculated with MOLE 2.0 PDB id
9ofh
Pores calculated on whole structure Pores calculated excluding ligands
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2 pores, coloured by radius 19 pores, coloured by radius 19 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.38 2.35 38.1 -0.93 -0.42 15.8 86 5 4 5 2 2 0 0  ATP 1001 E MG 1003 E
2 1.47 1.61 62.9 -1.71 -0.57 23.3 85 10 6 4 3 2 0 0  ATP 1001 D MG 1003 D
3 1.48 1.61 62.9 -1.70 -0.57 23.1 87 10 6 4 3 1 0 0  ATP 1001 C MG 1003 C
4 1.39 2.13 84.3 -1.19 -0.48 18.7 86 8 8 6 5 3 0 0  ATP 1001 D MG 1003 D
5 1.68 1.74 87.1 -1.79 -0.55 24.8 84 4 11 3 5 2 1 0  
6 1.48 1.62 121.5 -1.52 -0.54 21.2 86 10 10 8 5 4 0 0  ATP 1001 F MG 1003 F
7 1.46 1.83 140.3 -1.68 -0.50 22.4 82 10 12 5 4 4 1 0  ATP 1001 B MG 1003 B
8 1.34 2.31 142.3 -1.85 -0.66 21.2 92 14 11 17 6 1 0 0  ATP 1001 B MG 1003 B
9 1.46 1.50 153.6 -1.47 -0.48 20.6 85 12 14 10 7 5 1 0  ATP 1001 C MG 1003 C
10 1.32 2.18 155.0 -1.88 -0.64 22.1 86 10 15 12 4 3 1 0  ATP 1001 F MG 1003 F
11 1.17 1.73 162.0 -1.61 -0.50 15.8 84 4 13 16 6 6 1 0  ATP 1002 F
12 1.22 1.74 167.9 -1.43 -0.49 17.2 87 14 9 17 8 5 0 0  ATP 1001 B MG 1003 B ATP 1002 F
13 1.47 1.49 164.4 -1.92 -0.66 21.5 87 10 16 15 4 3 1 0  ATP 1001 A MG 1003 A
14 1.33 1.96 192.2 -1.28 -0.50 19.4 86 17 15 13 10 6 0 0  ATP 1001 A MG 1003 A ATP 1001 F MG 1003 F
15 1.32 2.02 189.7 -1.29 -0.50 19.6 86 17 15 13 10 6 0 0  ATP 1001 A MG 1003 A ATP 1001 B MG 1003 B
16 1.33 2.02 189.8 -1.29 -0.50 19.6 86 17 15 13 10 6 0 0  ATP 1001 B MG 1003 B ATP 1001 C MG 1003 C
17 1.37 2.36 199.9 -1.73 -0.56 23.4 86 14 17 11 8 6 0 0  ATP 1001 A MG 1003 A
18 1.39 1.39 265.7 -1.50 -0.52 21.7 86 21 22 16 13 8 0 0  ATP 1001 A MG 1003 A ATP 1001 C MG 1003 C
19 1.39 1.39 265.6 -1.51 -0.52 21.8 86 21 22 16 13 8 0 0  ATP 1001 B MG 1003 B ATP 1001 F MG 1003 F

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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