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PDBsum entry 9oay

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Pore analysis for: 9oay calculated with MOLE 2.0 PDB id
9oay
Pores calculated on whole structure Pores calculated excluding ligands

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6 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.72 1.91 53.2 -1.32 -0.04 22.9 79 7 2 2 5 3 0 0  DG 11 P YTI 12 P DT 9 T
2 1.69 1.87 60.9 -1.28 -0.28 20.4 81 6 2 3 5 1 0 0  DA 6 P DC 7 P DT 8 P DG 9 P DC 10 P DC 7 T DG 8 T
DT 9 T DA 10 T
3 3.10 3.21 71.4 -2.00 -0.37 25.6 77 9 4 2 3 4 0 0  DA 6 P DC 7 P DT 8 P DG 9 P DC 10 P DG 11 P YTI
12 P DC 7 T DG 8 T DT 9 T DA 10 T
4 1.27 2.35 101.0 -1.16 -0.22 22.1 79 9 4 0 5 3 0 0  DA 5 P DA 6 P DC 7 T DG 19 T DC 20 T

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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