 |
PDBsum entry 9o4x
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 9o4x calculated with MOLE 2.0
|
PDB id
|
|
|
|
9o4x
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
3 pores,
coloured by radius |
 |
4 pores,
coloured by radius
|
4 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.14 |
1.40 |
28.2 |
1.50 |
0.85 |
3.5 |
71 |
 |
1 |
0 |
1 |
8 |
5 |
1 |
0 |
 |
FO4 301 A
|
 |
 |
2 |
 |
1.33 |
2.91 |
32.1 |
1.35 |
0.82 |
4.3 |
72 |
0 |
1 |
2 |
8 |
6 |
1 |
0 |
FO4 301 A
|
 |
3 |
 |
2.61 |
3.29 |
73.9 |
-2.10 |
-0.54 |
17.4 |
83 |
5 |
6 |
10 |
0 |
3 |
1 |
0 |
|
 |
4 |
 |
1.28 |
1.72 |
113.9 |
0.22 |
0.42 |
11.3 |
73 |
5 |
4 |
4 |
12 |
10 |
0 |
0 |
FO4 301 A
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |