PDBsum entry 9o4f Go to PDB code:  Pore analysis for: 9o4f calculated with MOLE 2.0 PDB id 9o4f Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 13 pores, coloured by radius 13 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.43 1.65 28.8 -0.04 0.00 13.6 82 2 2 2 5 1 2 0  NAG 1 O 2 1.35 1.54 39.9 -2.58 -0.50 20.0 72 4 2 4 0 2 2 1   3 1.33 1.56 47.5 -2.17 -0.43 18.1 78 5 3 5 2 2 2 1   4 1.40 1.49 67.5 -2.14 -0.47 15.5 83 5 5 8 2 2 2 0  NAG 1 H NAG 2 H 5 1.55 1.71 97.1 -1.02 -0.38 16.5 89 7 5 9 7 1 2 0  NAG 801 D 6 1.58 1.69 104.5 -1.03 -0.36 16.9 89 8 7 9 8 1 2 0  NAG 801 F 7 1.28 1.50 107.6 0.35 0.08 8.2 80 6 3 13 17 6 2 1   8 1.42 1.62 107.8 0.22 -0.01 8.6 80 6 3 14 17 6 2 1   9 1.55 1.69 119.3 -0.73 -0.21 17.4 86 7 6 6 10 2 1 0  NAG 801 D 10 1.54 1.69 125.8 -1.46 -0.51 19.3 83 12 9 8 7 1 5 0  NAG 801 E 11 1.53 1.57 155.0 0.15 -0.04 12.2 84 6 8 8 21 0 2 0  NAG 801 D NAG 1 X NAG 2 X FUC 4 X 12 1.58 3.82 163.1 -1.18 -0.36 19.6 84 12 9 10 11 3 4 0  NAG 801 E NAG 1 O 13 1.50 1.55 185.8 0.24 0.05 10.5 83 5 8 10 22 2 3 0  NAG 801 D NAG 1 O NAG 1 X NAG 2 X FUC 4 X Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.