 |
PDBsum entry 9nox
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 9nox calculated with  MOLE 2.0
|
PDB id
|
|
|
|
9nox
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pores calculated on whole structure |
|
Pores calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
10 pores,
coloured by radius |
|
10 pores,
coloured by radius
|
10 pores,
coloured as in
list below
|
|
|
|
|
|
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.25 |
1.37 |
25.1 |
-1.82 |
-0.55 |
16.2 |
79 |
|
4 |
3 |
2 |
0 |
2 |
0 |
0 |
|
|
 |
|
2 |
 |
1.26 |
1.39 |
30.7 |
-1.49 |
-0.48 |
13.1 |
76 |
3 |
4 |
2 |
0 |
2 |
1 |
0 |
|
|
3 |
 |
2.00 |
2.74 |
31.3 |
-0.99 |
-0.19 |
21.2 |
92 |
4 |
3 |
5 |
3 |
2 |
0 |
0 |
|
|
4 |
 |
2.39 |
2.39 |
32.6 |
-2.64 |
-0.64 |
32.0 |
85 |
2 |
5 |
2 |
0 |
1 |
0 |
0 |
|
|
5 |
 |
1.17 |
1.55 |
38.1 |
1.35 |
0.41 |
7.6 |
80 |
1 |
1 |
0 |
11 |
4 |
0 |
0 |
|
|
6 |
 |
1.65 |
1.62 |
75.3 |
-2.01 |
-0.58 |
22.4 |
85 |
9 |
7 |
7 |
2 |
2 |
1 |
1 |
|
|
7 |
 |
1.67 |
1.87 |
88.8 |
-2.28 |
-0.62 |
25.3 |
88 |
9 |
9 |
7 |
3 |
1 |
0 |
1 |
|
|
8 |
 |
1.22 |
1.21 |
125.4 |
-1.50 |
-0.40 |
20.1 |
83 |
13 |
8 |
8 |
8 |
4 |
1 |
2 |
|
|
9 |
 |
1.49 |
1.58 |
128.3 |
-2.15 |
-0.50 |
25.7 |
87 |
13 |
5 |
7 |
5 |
3 |
1 |
0 |
|
 |
10 |
 |
1.30 |
1.37 |
64.8 |
-1.99 |
-0.32 |
17.1 |
88 |
3 |
0 |
2 |
5 |
1 |
1 |
0 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program