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PDBsum entry 9n4t

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 9n4t calculated with MOLE 2.0 PDB id
9n4t
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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12 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.30 1.30 15.0 0.05 -0.23 5.7 74 0 1 2 1 2 2 0  
2 1.59 3.17 15.8 -0.25 0.52 9.2 70 2 0 1 1 4 1 0  
3 1.36 1.36 16.0 -0.21 0.25 9.4 65 1 1 1 0 4 1 0  
4 2.02 3.36 17.9 -0.97 -0.20 16.6 78 1 2 2 1 2 1 0  
5 1.32 1.32 18.8 0.01 0.39 7.8 68 2 0 1 1 5 1 0  
6 2.56 2.61 18.8 -2.24 -0.15 35.2 70 4 2 0 1 2 0 0  
7 1.10 1.54 44.5 1.80 0.45 5.6 81 1 3 1 10 3 0 0  
8 1.10 1.54 44.5 1.80 0.45 5.6 81 1 3 1 10 3 0 0  
9 1.25 1.67 19.7 0.30 0.18 9.5 69 1 2 0 6 1 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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