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PDBsum entry 9n4q
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Pore analysis for: 9n4q calculated with  MOLE 2.0
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PDB id
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9n4q
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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29 pores,
coloured by radius |
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31 pores,
coloured by radius
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31 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.24 |
1.47 |
45.2 |
-2.17 |
-0.48 |
27.6 |
80 |
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7 |
4 |
2 |
2 |
1 |
0 |
0 |
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2 |
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1.58 |
2.23 |
47.6 |
-1.48 |
-0.42 |
25.5 |
79 |
4 |
5 |
1 |
6 |
1 |
1 |
0 |
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3 |
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3.93 |
5.09 |
73.7 |
-0.68 |
0.06 |
11.2 |
73 |
5 |
5 |
5 |
11 |
5 |
4 |
0 |
POV 1001 A POV 1002 A POV 1001 D
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4 |
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2.56 |
4.03 |
85.2 |
0.09 |
0.40 |
10.7 |
71 |
4 |
5 |
4 |
11 |
6 |
3 |
0 |
POV 1008 C POV 1002 D POV 1003 D
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5 |
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1.75 |
3.20 |
91.6 |
-2.45 |
-0.46 |
28.5 |
88 |
12 |
12 |
8 |
3 |
2 |
0 |
0 |
NAG 1 T NAG 2 T BMA 3 T MAN 5 T
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6 |
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1.52 |
1.75 |
100.1 |
-1.86 |
-0.52 |
25.4 |
79 |
4 |
8 |
3 |
7 |
1 |
4 |
0 |
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7 |
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1.26 |
1.48 |
105.5 |
-1.25 |
-0.10 |
22.4 |
75 |
13 |
4 |
1 |
6 |
6 |
1 |
0 |
NAG 1 G NAG 2 G
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8 |
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1.75 |
3.21 |
110.1 |
-2.32 |
-0.39 |
28.9 |
84 |
14 |
11 |
7 |
6 |
4 |
1 |
0 |
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9 |
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2.55 |
4.02 |
111.8 |
0.59 |
0.51 |
8.4 |
71 |
3 |
4 |
5 |
22 |
9 |
3 |
0 |
POV 1001 A POV 1002 A POV 1008 C POV 1001 D POV
1002 D POV 1003 D
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10 |
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1.28 |
1.49 |
125.4 |
-2.83 |
-0.33 |
37.6 |
78 |
22 |
8 |
4 |
5 |
3 |
0 |
0 |
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11 |
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1.52 |
1.75 |
131.7 |
-2.34 |
-0.51 |
28.5 |
79 |
10 |
14 |
5 |
6 |
3 |
3 |
0 |
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12 |
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2.76 |
2.91 |
141.4 |
-2.21 |
-0.60 |
26.4 |
83 |
12 |
14 |
12 |
5 |
3 |
2 |
0 |
POV 1001 B POV 1002 B NAG 1 N NAG 2 N
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13 |
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1.43 |
1.77 |
143.6 |
-1.96 |
-0.46 |
25.3 |
84 |
11 |
13 |
8 |
9 |
3 |
4 |
0 |
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14 |
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1.43 |
1.77 |
160.1 |
-2.01 |
-0.44 |
25.4 |
84 |
15 |
17 |
10 |
13 |
4 |
4 |
0 |
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15 |
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1.40 |
1.77 |
160.7 |
-1.71 |
-0.42 |
22.9 |
86 |
12 |
14 |
10 |
12 |
3 |
3 |
0 |
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16 |
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1.32 |
1.51 |
167.4 |
-2.52 |
-0.63 |
29.3 |
83 |
18 |
17 |
12 |
3 |
3 |
2 |
0 |
POV 1001 B POV 1002 B NAG 1 N NAG 2 N
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17 |
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1.25 |
1.47 |
173.8 |
-2.61 |
-0.61 |
31.0 |
83 |
17 |
17 |
12 |
4 |
3 |
2 |
0 |
POV 1001 B POV 1002 B NAG 1 N NAG 2 N
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18 |
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1.39 |
2.20 |
200.1 |
-0.65 |
-0.16 |
15.8 |
83 |
8 |
12 |
10 |
19 |
5 |
4 |
0 |
POV 1001 B POV 1002 B POV 1004 D NAG 1 N NAG 2 N
NAG 1 V NAG 1 W NAG 2 W
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19 |
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2.65 |
2.80 |
214.5 |
-2.05 |
-0.46 |
26.7 |
81 |
19 |
16 |
11 |
7 |
8 |
3 |
0 |
POV 1001 B POV 1002 B NAG 1 G NAG 2 G NAG 1 N NAG
2 N
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20 |
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1.43 |
1.76 |
221.1 |
-1.85 |
-0.42 |
24.8 |
84 |
23 |
19 |
12 |
12 |
5 |
2 |
0 |
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21 |
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1.36 |
2.04 |
234.1 |
-1.16 |
-0.28 |
22.0 |
84 |
21 |
15 |
12 |
23 |
5 |
0 |
0 |
POV 1004 D
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22 |
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1.84 |
3.81 |
249.2 |
-0.96 |
-0.13 |
14.4 |
81 |
11 |
10 |
12 |
16 |
8 |
5 |
1 |
POV 1009 A POV 1001 B POV 1002 B POV 601 F NAG 1
N NAG 2 N BMA 3 N NAG 1 O NAG 2 O
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23 |
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1.75 |
1.80 |
282.3 |
-2.16 |
-0.39 |
29.0 |
82 |
35 |
22 |
13 |
12 |
8 |
2 |
0 |
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24 |
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1.76 |
3.64 |
296.2 |
-1.17 |
-0.19 |
19.5 |
83 |
18 |
15 |
16 |
21 |
8 |
3 |
1 |
POV 1009 A POV 1002 B POV 601 F NAG 1 N NAG 2 N
BMA 3 N NAG 1 O NAG 2 O
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25 |
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1.42 |
3.64 |
315.3 |
-0.61 |
-0.03 |
15.6 |
81 |
16 |
13 |
15 |
29 |
11 |
4 |
1 |
POV 1009 A POV 1002 B POV 1008 C POV 1002 D POV
1003 D POV 601 F NAG 1 N NAG 2 N BMA 3 N NAG 1 O
NAG 2 O
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26 |
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1.49 |
1.47 |
321.9 |
-1.35 |
-0.14 |
19.9 |
82 |
22 |
14 |
18 |
18 |
9 |
4 |
2 |
POV 1009 A POV 601 F NAG 1 N NAG 2 N BMA 3 N NAG
1 O NAG 2 O
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27 |
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1.29 |
1.26 |
349.1 |
-1.03 |
-0.09 |
19.8 |
81 |
23 |
17 |
18 |
30 |
11 |
3 |
1 |
POV 1001 A POV 1002 A POV 1009 A POV 1001 D POV
601 F NAG 1 N NAG 2 N BMA 3 N NAG 1 O NAG 2 O
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28 |
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1.62 |
1.58 |
348.8 |
-2.10 |
-0.52 |
26.6 |
84 |
29 |
32 |
22 |
14 |
8 |
4 |
0 |
POV 1001 B POV 1002 B NAG 1 N NAG 2 N
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29 |
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2.02 |
3.76 |
396.7 |
-0.69 |
0.02 |
16.1 |
79 |
24 |
12 |
18 |
32 |
17 |
5 |
2 |
POV 1001 A POV 1002 A POV 1009 A POV 1001 D POV
601 F NAG 1 G NAG 2 G NAG 1 N NAG 2 N BMA 3 N NAG
1 O NAG 2 O
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30 |
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1.39 |
3.88 |
524.7 |
-1.10 |
-0.16 |
18.7 |
81 |
33 |
27 |
27 |
36 |
19 |
7 |
2 |
POV 1009 A POV 1002 B POV 1008 C POV 1002 D POV
1003 D POV 601 F NAG 1 N NAG 2 N BMA 3 N NAG 1 O
NAG 2 O
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31 |
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1.27 |
1.38 |
26.4 |
-2.52 |
-0.52 |
36.5 |
86 |
5 |
6 |
0 |
3 |
0 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program