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PDBsum entry 9n4f

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 9n4f calculated with MOLE 2.0 PDB id
9n4f
Pores calculated on whole structure Pores calculated excluding ligands

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12 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.80 2.00 39.2 -2.34 -0.65 23.5 84 6 6 5 2 1 0 0  
2 2.09 4.37 54.8 -0.38 -0.14 10.5 86 2 6 6 5 3 3 0  
3 2.06 4.37 55.2 -0.34 -0.15 10.0 86 2 6 6 5 3 3 0  
4 2.21 4.31 87.6 -0.54 -0.19 12.1 85 5 6 6 6 3 4 0  
5 2.38 4.21 88.9 -2.38 -0.61 26.1 82 14 8 9 5 3 0 0  
6 2.50 2.96 95.0 -2.06 -0.60 20.1 77 7 10 6 0 6 4 0  
7 2.47 2.93 95.3 -2.05 -0.62 19.7 77 7 10 6 0 6 4 0  
8 2.46 2.96 95.8 -2.05 -0.61 19.7 77 7 10 6 0 6 4 0  
9 1.93 3.05 125.8 -1.90 -0.58 21.9 89 10 9 12 4 2 1 0  
10 2.45 3.54 139.5 -2.10 -0.62 24.0 88 12 11 16 6 2 0 0  
11 1.92 3.03 140.8 -2.21 -0.58 26.6 86 16 12 14 8 1 1 0  
12 2.81 3.40 172.3 -2.19 -0.66 24.2 88 16 13 18 5 3 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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