PDBsum entry 9m2f

Pore analysis for: 9m2f calculated with

MOLE 2.0

PDB id

9m2f

Pores calculated on whole structure

Pores calculated excluding ligands

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10 pores, coloured by radius

11 pores, coloured by radius

11 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.24

2.43

30.9

0.97

0.22

4.6

78

1

1

4

7

3

0

1

2

1.31

1.50

35.1

0.25

0.84

5.2

65

1

1

0

5

7

0

0

3

3.34

4.32

36.6

-1.02

-0.21

22.4

81

7

4

2

3

1

0

0

4

1.29

2.38

37.3

1.64

0.85

2.2

70

1

0

1

10

5

0

0

5

1.25

2.12

48.0

0.39

0.42

3.8

73

0

1

5

7

7

1

1

6

1.15

2.95

68.5

0.93

0.75

5.3

72

3

1

2

13

11

0

0

7

1.19

2.97

70.9

1.52

0.76

3.5

75

3

0

3

19

9

0

0

8

1.29

1.85

79.5

-0.18

0.21

12.0

80

3

5

6

8

8

1

0

9

1.23

2.19

82.0

0.44

0.29

10.2

82

3

4

7

14

6

1

0

10

1.22

2.83

84.7

0.31

0.27

9.5

78

6

3

7

10

8

1

0

11

1.23

2.81

98.3

0.02

0.00

9.3

81

5

4

10

10

6

2

2

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.