 |
PDBsum entry 9m1o
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 9m1o calculated with MOLE 2.0
|
PDB id
|
|
|
|
9m1o
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
6 pores,
coloured by radius |
 |
6 pores,
coloured by radius
|
6 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
2.01 |
2.39 |
29.0 |
-1.21 |
-0.33 |
22.3 |
85 |
 |
4 |
4 |
2 |
3 |
1 |
1 |
0 |
 |
|
 |
 |
2 |
 |
3.64 |
4.31 |
29.1 |
-0.78 |
-0.01 |
20.8 |
81 |
5 |
4 |
2 |
2 |
2 |
0 |
0 |
|
 |
3 |
 |
2.01 |
2.40 |
32.8 |
-0.77 |
-0.44 |
16.9 |
86 |
3 |
3 |
1 |
5 |
0 |
1 |
0 |
|
 |
4 |
 |
2.66 |
2.71 |
38.6 |
-0.20 |
-0.14 |
15.8 |
87 |
5 |
3 |
2 |
5 |
1 |
0 |
0 |
|
 |
5 |
 |
2.67 |
2.69 |
96.8 |
-1.98 |
-0.61 |
26.1 |
86 |
10 |
8 |
3 |
3 |
1 |
0 |
0 |
|
 |
6 |
 |
2.17 |
3.87 |
39.4 |
-1.52 |
-0.50 |
19.4 |
80 |
4 |
3 |
2 |
2 |
0 |
0 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |