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PDBsum entry 9lyc

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 9lyc calculated with MOLE 2.0 PDB id
9lyc
Pores calculated on whole structure Pores calculated excluding ligands

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9 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.18 5.31 28.5 -2.14 -0.62 25.4 84 6 3 4 1 1 0 0  
2 1.25 1.40 64.9 0.51 0.15 6.3 87 2 1 5 13 3 1 0  
3 1.36 1.52 72.4 -1.81 -0.48 16.4 85 8 2 6 3 3 0 0  
4 1.66 1.71 75.5 -1.91 -0.75 12.8 85 3 6 12 3 2 0 0  
5 1.89 3.76 113.5 -1.98 -0.34 23.5 85 11 6 10 1 3 0 0  
6 1.32 1.38 139.3 -0.43 -0.11 12.3 83 7 4 8 16 4 1 0  
7 1.32 1.63 157.6 -1.97 -0.59 22.4 88 12 7 12 5 1 1 0  
8 1.23 1.68 200.3 0.38 0.18 9.2 78 7 3 7 35 12 5 2  
9 1.16 1.19 200.3 -1.32 -0.29 19.4 84 14 11 11 12 4 4 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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