PDBsum entry 9lmo

Pore analysis for: 9lmo calculated with

MOLE 2.0

PDB id

9lmo

Pores calculated on whole structure

Pores calculated excluding ligands

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9 pores, coloured by radius

9 pores, coloured by radius

9 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.34

1.47

26.0

-2.19

-0.57

19.1

88

3

2

5

0

2

0

0

2

1.36

2.01

26.9

-1.16

-0.70

9.6

92

3

0

3

1

0

1

0

3

1.12

1.12

39.5

-0.54

-0.48

6.6

85

2

0

6

2

2

1

0

4

1.22

1.24

29.5

-0.61

0.04

18.6

80

5

0

0

6

1

0

0

5

1.59

1.79

31.4

-1.47

-0.30

18.9

79

6

2

3

3

1

2

0

6

1.21

1.21

32.3

-1.50

-0.09

23.6

81

5

1

2

4

1

1

0

7

1.16

1.16

32.6

-0.79

-0.07

17.8

78

6

1

1

6

2

1

0

8

1.38

1.47

34.9

-1.24

-0.27

22.2

84

6

1

2

5

0

1

0

9

1.24

1.28

50.6

-0.39

0.29

9.8

70

4

1

1

8

11

1

1

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.