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PDBsum entry 9kjc

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Pore analysis for: 9kjc calculated with MOLE 2.0 PDB id
9kjc
Pores calculated on whole structure Pores calculated excluding ligands

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9 pores, coloured by radius 11 pores, coloured by radius 11 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.13 1.38 30.3 1.28 0.36 5.5 78 1 1 2 5 2 0 0  
2 1.11 1.34 42.7 -0.99 -0.41 15.4 90 3 4 5 6 2 0 0  
3 1.18 1.90 45.8 1.78 0.88 3.5 72 0 1 1 12 12 0 0  BLD 1301 A
4 1.82 2.13 56.6 -1.08 -0.54 10.5 89 3 1 5 5 1 0 0  
5 1.77 2.79 56.9 -1.15 -0.60 11.4 89 4 2 5 5 1 0 0  
6 1.35 1.74 71.4 0.22 -0.20 6.5 88 9 1 4 12 0 3 1  
7 1.17 1.22 73.1 0.63 0.11 8.0 85 5 4 9 15 3 3 1  
8 1.44 1.53 103.1 0.00 -0.05 12.4 82 5 7 4 19 3 0 0  BLD 1301 A
9 1.27 2.71 123.8 -0.15 0.01 14.8 88 9 8 11 13 1 1 1  
10 1.20 2.72 153.3 -0.17 -0.18 13.3 90 12 9 8 18 1 3 0  
11 1.27 2.83 176.0 0.35 0.09 12.5 84 9 11 9 29 2 1 1  BLD 1301 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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