PDBsum entry 9kfj Go to PDB code:  Tunnel analysis for: 9kfj calculated with MOLE 2.0 PDB id 9kfj Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.18 2.32 28.1 -1.67 -0.09 23.4 79 5 2 2 3 1 0 1   2 1.18 2.44 31.2 -1.69 0.13 22.4 76 5 0 3 3 2 0 1   3 1.20 2.34 46.3 -0.83 -0.34 12.9 86 3 2 5 5 1 1 3   4 1.88 1.88 15.3 -1.71 -0.64 18.5 87 1 1 1 1 1 0 0   5 1.41 2.08 26.8 -1.04 -0.01 27.9 83 3 3 1 4 0 0 0   6 1.41 2.09 27.8 -1.37 -0.22 23.7 79 5 3 1 4 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.