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PDBsum entry 9kbj

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Pore analysis for: 9kbj calculated with MOLE 2.0 PDB id
9kbj
Pores calculated on whole structure Pores calculated excluding ligands

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31 pores, coloured by radius 20 pores, coloured by radius 20 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.78 4.92 33.4 -2.02 -0.58 20.0 86 2 4 4 4 1 1 0  ANP 602 L
2 3.41 5.10 33.9 -2.23 -0.46 23.2 83 4 5 3 5 1 1 0  
3 2.97 4.92 36.0 -1.82 -0.43 26.1 84 6 3 2 2 1 1 0  
4 1.20 3.18 37.6 -1.39 -0.39 14.3 81 1 3 3 1 3 2 0  MG 601 F ANP 602 F
5 1.21 2.10 43.0 -1.49 -0.49 13.5 84 1 4 3 0 3 1 0  ANP 602 G
6 0.85 1.78 48.6 -1.27 -0.44 17.8 88 4 3 4 5 0 1 0  MG 601 B ANP 602 B
7 2.80 3.65 53.0 -2.07 0.15 37.5 88 10 3 2 3 0 0 0  
8 0.85 1.78 58.2 -1.28 -0.35 15.2 81 5 2 4 7 1 2 0  MG 601 B ANP 602 B
9 2.19 2.17 63.7 -2.07 -0.12 30.9 84 11 3 1 3 1 0 0  
10 1.95 2.11 65.1 -2.21 -0.47 19.7 86 4 3 6 5 1 1 0  
11 1.25 1.34 66.4 -1.52 -0.52 14.6 85 4 4 5 3 4 2 0  MG 601 J ANP 602 J
12 2.47 3.51 71.2 -1.97 -0.04 29.8 80 11 3 2 5 1 1 0  
13 2.16 3.60 76.1 -1.81 -0.37 20.9 82 7 6 7 4 2 2 1  ANP 602 H
14 2.19 2.20 77.5 -0.99 0.04 20.7 83 13 6 4 8 3 0 0  
15 1.21 1.37 79.0 -1.02 -0.27 18.7 82 9 4 3 9 0 2 0  MG 601 B ANP 602 B MG 601 L ANP 602 L
16 4.02 6.41 85.3 -1.46 0.10 22.2 88 8 3 11 3 5 0 0  
17 3.36 4.71 89.6 -1.40 0.06 19.8 85 8 2 11 3 9 0 0  
18 3.15 4.47 93.2 -1.78 -0.06 20.5 87 10 3 11 4 7 0 0  
19 4.02 6.40 97.3 -1.74 -0.04 19.0 86 9 3 14 4 8 0 0  
20 1.33 1.45 27.6 0.31 0.34 8.0 74 2 1 3 4 2 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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