 |
PDBsum entry 9kbh
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 9kbh calculated with MOLE 2.0
|
PDB id
|
|
|
|
9kbh
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
15 pores,
coloured by radius |
 |
15 pores,
coloured by radius
|
15 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
2.55 |
3.48 |
33.1 |
-1.81 |
-0.32 |
22.9 |
78 |
 |
3 |
2 |
4 |
3 |
2 |
1 |
0 |
 |
DA 1 H
|
 |
 |
2 |
 |
2.04 |
2.05 |
35.5 |
-2.02 |
-0.53 |
20.1 |
89 |
5 |
1 |
5 |
3 |
0 |
1 |
0 |
ANP 601 A
|
 |
3 |
 |
2.21 |
2.24 |
41.2 |
-2.52 |
-0.38 |
29.5 |
82 |
7 |
2 |
3 |
1 |
2 |
1 |
0 |
DA 1 H
|
 |
4 |
 |
2.04 |
2.08 |
64.3 |
-1.23 |
-0.48 |
14.9 |
99 |
5 |
2 |
10 |
4 |
0 |
0 |
0 |
ANP 601 F DT 6 H
|
 |
5 |
 |
2.22 |
2.24 |
69.4 |
-1.90 |
-0.61 |
18.1 |
86 |
6 |
7 |
6 |
2 |
2 |
1 |
0 |
DT 5 H DT 6 H
|
 |
6 |
 |
2.20 |
2.25 |
70.2 |
-1.91 |
-0.46 |
21.4 |
81 |
9 |
4 |
8 |
4 |
4 |
2 |
0 |
DA 1 H
|
 |
7 |
 |
2.96 |
3.14 |
74.8 |
-2.25 |
-0.54 |
24.2 |
89 |
6 |
6 |
7 |
2 |
2 |
0 |
0 |
DA 1 H DT 5 H DT 6 H
|
 |
8 |
 |
2.95 |
3.14 |
87.4 |
-1.71 |
-0.47 |
18.9 |
91 |
7 |
5 |
10 |
4 |
2 |
0 |
0 |
DA 1 H DT 5 H DT 6 H
|
 |
9 |
 |
2.87 |
3.63 |
103.2 |
-1.96 |
-0.55 |
20.6 |
85 |
9 |
8 |
11 |
5 |
4 |
1 |
0 |
DA 1 H DT 5 H DT 6 H
|
 |
10 |
 |
2.76 |
2.76 |
115.9 |
-1.62 |
-0.26 |
22.1 |
84 |
12 |
4 |
6 |
8 |
2 |
2 |
0 |
DA 1 H
|
 |
11 |
 |
1.23 |
2.43 |
124.6 |
-1.53 |
-0.47 |
18.4 |
84 |
12 |
6 |
13 |
13 |
4 |
1 |
2 |
ANP 601 F DA 1 H
|
 |
12 |
 |
2.57 |
3.42 |
140.1 |
-1.63 |
-0.35 |
21.1 |
82 |
15 |
6 |
10 |
9 |
4 |
3 |
0 |
|
 |
13 |
 |
1.20 |
1.19 |
148.6 |
-1.05 |
-0.27 |
15.2 |
80 |
14 |
4 |
13 |
11 |
6 |
3 |
2 |
ANP 601 D DA 1 H
|
 |
14 |
 |
1.26 |
2.67 |
188.1 |
-0.51 |
-0.12 |
12.6 |
82 |
8 |
5 |
11 |
13 |
4 |
1 |
1 |
ANP 601 F DT 6 H
|
 |
15 |
 |
1.22 |
1.42 |
210.8 |
-0.40 |
0.08 |
15.2 |
74 |
14 |
3 |
8 |
17 |
8 |
2 |
1 |
ANP 601 F
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |