PDBsum entry 9k3l

Pore analysis for: 9k3l calculated with

MOLE 2.0

PDB id

9k3l

Pores calculated on whole structure

Pores calculated excluding ligands

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14 pores, coloured by radius

14 pores, coloured by radius

14 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.17

1.49

25.5

0.79

0.35

5.0

81

1

1

1

4

2

1

0

2

2.24

4.57

28.6

-0.63

0.05

14.9

77

1

2

1

4

3

0

0

3

1.16

1.58

31.5

0.06

0.02

4.2

72

1

1

2

4

4

1

0

4

1.17

1.35

73.0

-1.39

-0.23

20.1

84

6

4

4

5

3

2

1

5

1.19

1.39

90.7

-1.46

-0.31

20.4

85

9

4

7

4

4

0

0

6

1.18

1.69

91.9

-0.25

0.00

12.5

82

4

2

5

10

5

0

0

7

1.36

1.36

99.8

-1.41

-0.36

17.8

84

6

4

3

3

3

1

0

8

1.35

1.65

118.7

-1.19

-0.31

15.6

82

7

6

9

4

5

2

1

9

1.19

1.41

124.6

-1.66

-0.34

24.0

83

9

6

4

6

3

1

0

10

1.17

1.64

126.5

-0.62

-0.07

16.1

79

4

4

2

11

5

1

0

11

1.38

1.54

126.2

-1.25

-0.45

14.5

85

8

6

12

6

4

1

2

12

1.32

1.63

153.3

-1.45

-0.34

18.8

80

7

8

6

5

5

3

1

13

1.21

1.52

159.2

-1.78

-0.50

20.6

88

12

8

15

9

3

1

1

14

1.30

1.31

196.4

-1.63

-0.48

18.1

85

12

9

19

6

6

1

1

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.