PDBsum entry 9jr3 Go to PDB code:  Tunnel analysis for: 9jr3 calculated with MOLE 2.0 PDB id 9jr3 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.23 1.27 21.8 -1.18 -0.10 8.4 83 3 0 3 4 1 0 1   2 1.06 1.06 24.3 -0.81 -0.17 19.5 76 3 2 2 3 2 0 0   3 1.21 1.30 16.1 -0.51 -0.56 9.2 88 2 1 1 2 0 0 0   4 1.11 3.41 18.8 -0.60 0.30 15.0 73 1 3 0 3 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.