PDBsum entry 9jkq

Pore analysis for: 9jkq calculated with

MOLE 2.0

PDB id

9jkq

Pores calculated on whole structure

Pores calculated excluding ligands

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12 pores, coloured by radius

10 pores, coloured by radius

10 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.20

1.20

27.0

-0.07

0.08

14.6

79

1

2

4

6

0

0

0

2

1.16

1.30

47.4

-0.68

0.18

11.3

75

5

1

3

5

6

0

0

3

1.33

1.62

60.3

-1.16

-0.46

13.6

81

6

5

7

3

4

2

3

4

1.30

1.66

60.1

-0.89

-0.33

11.9

93

3

2

6

3

1

1

0

5

1.59

1.85

74.5

-1.91

-0.66

13.2

82

5

4

9

4

3

0

0

6

1.49

3.04

83.6

-1.86

-0.63

18.5

86

8

4

10

8

1

0

1

7

1.26

1.25

89.4

-1.49

-0.49

19.7

83

6

5

8

9

1

0

1

8

1.37

1.44

216.2

-0.88

-0.31

15.0

83

13

9

13

15

10

3

3

9

1.08

2.76

32.9

0.85

0.31

2.5

86

0

1

3

6

4

0

1

10

1.28

2.00

39.9

-1.02

-0.20

19.9

81

4

3

2

3

3

0

2

B40 401 R

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.