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PDBsum entry 9jhp

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 9jhp calculated with MOLE 2.0 PDB id
9jhp
Pores calculated on whole structure Pores calculated excluding ligands

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22 pores, coloured by radius 22 pores, coloured by radius 22 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.30 2.26 26.5 2.41 0.79 4.3 64 2 0 0 8 2 0 1  
2 1.31 1.59 83.9 0.87 0.30 7.2 81 3 3 5 13 6 0 1  
3 1.41 1.59 115.3 -1.75 -0.31 23.9 86 11 3 8 6 3 0 0  
4 1.27 1.56 132.2 -1.38 -0.42 15.6 88 6 8 15 8 5 1 1  
5 1.19 1.25 159.5 -1.01 -0.35 16.0 85 7 10 11 13 5 1 2  
6 1.24 1.35 171.1 -1.20 -0.26 17.6 87 13 5 12 14 8 1 1  
7 1.31 2.01 172.6 -1.89 -0.48 22.1 83 8 12 13 6 4 0 2  
8 1.40 2.26 175.8 -0.97 -0.08 20.1 81 13 6 8 14 10 0 1  
9 1.38 1.83 192.9 -1.38 -0.41 19.5 83 12 10 10 8 4 1 1  
10 1.23 1.30 209.8 -1.02 -0.29 14.9 85 8 8 10 9 8 1 1  
11 1.38 1.82 232.7 -1.13 -0.22 20.9 83 17 8 7 14 7 1 1  
12 1.24 1.16 264.8 -1.28 -0.42 18.3 89 14 7 14 13 1 1 0  
13 1.31 1.71 277.8 -0.82 -0.27 12.3 89 7 7 12 15 5 2 0  
14 1.30 1.53 296.0 -1.36 -0.37 20.0 82 16 17 14 14 8 1 3  
15 1.05 1.16 295.8 -0.95 -0.19 19.3 88 18 4 8 17 3 1 0  
16 1.39 1.30 297.3 -0.53 -0.21 13.6 87 10 7 6 17 4 1 0  
17 1.78 1.98 332.4 -0.66 -0.06 16.4 78 11 6 7 14 8 1 2  
18 1.37 1.58 328.0 -0.04 0.22 15.2 75 12 3 1 16 11 1 2  
19 1.22 1.41 395.1 -0.67 -0.12 14.2 82 13 9 13 22 13 2 3  
20 1.42 1.45 450.1 -0.65 -0.11 17.1 79 17 11 6 22 12 2 3  
21 1.30 1.53 435.5 -0.94 -0.15 18.1 79 15 13 11 20 12 1 4  
22 1.13 1.32 517.6 -0.38 -0.03 15.4 82 20 7 8 25 10 2 2  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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