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PDBsum entry 9jhj

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 9jhj calculated with MOLE 2.0 PDB id
9jhj
Pores calculated on whole structure Pores calculated excluding ligands

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5 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.37 1.47 35.7 0.39 0.23 6.0 79 0 2 2 8 5 0 0  
2 1.20 1.38 157.5 -0.80 -0.25 12.4 83 10 6 9 13 6 2 0  
3 1.27 1.28 168.0 -0.95 -0.30 14.6 86 11 7 10 10 2 1 1  
4 1.31 1.46 244.0 -0.42 -0.12 11.9 83 13 9 10 23 5 4 1  
5 1.31 1.35 256.1 -0.92 -0.28 13.9 86 16 10 15 19 5 1 1  
6 1.45 1.80 27.4 -0.27 0.29 22.2 80 3 3 1 5 3 1 0  18C 401 R

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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