spacer
spacer

PDBsum entry 9jfz

Go to PDB code: 
Top Page protein Protein-protein interface(s) links
Signaling protein/immune system PDB id
9jfz
Contents
Protein chains
235 a.a.
338 a.a.
57 a.a.
126 a.a.
293 a.a.
procheck   Generate full PROCHECK analyses

PROCHECK summary for 9jfz

Ramachandran plot

PROCHECK statistics

1. Ramachandran Plot statistics


                                         No. of
                                        residues     %-tage
                                         ------      ------
Most favoured regions      [A,B,L]          833       88.4%*  
Additional allowed regions [a,b,l,p]        105       11.1%          
Generously allowed regions [~a,~b,~l,~p]      3        0.3%          
Disallowed regions         [XX]               1        0.1%*  
                                           ----      ------
Non-glycine and non-proline residues        942      100.0%

End-residues (excl. Gly and Pro)             11

Glycine residues                             64
Proline residues                             32
                                           ----
Total number of residues                   1049


Based on an analysis of 118 structures of resolution of at least 2.0 Angstroms and R-factor no greater than 20.0 a good quality model would be expected to have over 90% in the most favoured regions [A,B,L].


2. G-Factors

                                                Average
Parameter                            Score       Score
---------                            -----       -----
Dihedral angles:-
     Phi-psi distribution            -0.15      
     Chi1-chi2 distribution          -0.72*     
     Chi1 only                       -0.07      
     Chi3 & chi4                      0.44      
     Omega                           -0.16      
                                                  -0.20      
                                                  =====
Main-chain covalent forces:-
     Main-chain bond lengths          0.67      
     Main-chain bond angles           0.47      
                                                   0.55      
                                                  =====

     OVERALL AVERAGE                               0.10      
                                                  =====

G-factors provide a measure of how unusual, or out-of-the-ordinary, a property is.

Values below -0.5*  - unusual
Values below -1.0** - highly unusual
Important note: The main-chain bond-lengths and bond angles are compared with the Engh & Huber (1991) ideal values derived from small-molecule data. Therefore, structures refined using different restraints may show apparently large deviations from normality.

 

spacer

spacer