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PDBsum entry 9jfy

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 9jfy calculated with MOLE 2.0 PDB id
9jfy
Pores calculated on whole structure Pores calculated excluding ligands

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9 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.99 2.05 29.1 -1.96 -0.65 21.5 86 4 5 4 1 2 0 0  
2 1.95 2.05 31.7 -0.53 -0.36 12.0 86 4 2 3 3 1 0 0  
3 1.27 1.28 36.5 -1.43 -0.45 16.0 72 3 3 0 1 2 3 0  
4 2.55 2.55 43.6 -2.19 -0.72 26.7 86 7 9 4 2 1 0 0  
5 1.77 4.00 50.2 -1.80 -0.43 21.5 79 8 4 4 2 3 2 2  
6 2.98 4.00 52.4 -2.36 -0.59 32.2 82 7 8 3 0 2 0 0  
7 1.99 2.04 107.5 -1.04 -0.32 13.1 87 7 2 9 5 4 1 0  
8 1.19 1.27 214.5 -0.93 -0.16 15.9 82 15 9 16 16 11 2 0  
9 1.29 2.32 30.5 -0.47 -0.15 17.3 82 2 2 1 3 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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