PDBsum entry 9jcc Go to PDB code:  Pore analysis for: 9jcc calculated with MOLE 2.0 PDB id 9jcc Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   27 pores, coloured by radius 27 pores, coloured by radius 27 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.88 3.07 72.2 -2.09 -0.37 23.6 86 7 3 13 4 3 0 0   2 3.99 3.99 73.6 -2.42 -0.60 24.3 92 8 5 14 1 0 0 0   3 2.99 3.71 74.6 -0.94 -0.14 20.1 74 7 3 4 7 2 0 0   4 1.20 1.38 85.0 -0.97 -0.06 17.2 70 7 4 2 7 2 2 0   5 1.20 3.01 99.0 -0.71 0.01 18.9 74 6 4 4 11 4 2 0   6 1.22 1.22 101.0 -0.68 -0.01 16.6 76 6 4 5 13 5 2 0   7 1.42 1.44 104.4 -0.88 -0.11 19.5 79 10 7 6 12 3 2 1   8 1.20 1.37 117.3 -1.98 -0.37 22.3 83 10 5 15 6 2 2 0   9 1.20 1.19 115.1 -1.15 -0.19 20.1 76 11 5 6 8 4 2 0   10 1.26 2.92 115.6 -0.57 0.07 16.1 74 7 4 6 15 4 2 0   11 1.20 2.92 124.4 -0.91 0.00 17.0 72 10 3 6 14 6 4 1   12 1.17 1.18 127.1 -0.80 -0.08 15.5 81 10 5 13 14 5 0 0   13 1.48 1.61 128.5 0.17 0.22 14.6 78 5 5 5 17 6 0 0   14 1.39 1.56 127.9 -1.26 -0.25 21.6 78 11 6 5 8 3 2 0   15 1.34 1.44 146.7 0.69 0.16 10.7 78 7 8 9 25 7 0 0   16 1.46 1.65 158.6 -0.86 -0.09 19.5 79 11 6 8 16 5 2 0   17 1.42 1.63 160.2 -2.03 -0.43 23.8 86 14 7 17 7 3 2 0   18 1.28 1.26 172.6 0.36 0.29 11.2 75 8 4 8 26 10 3 1   19 1.15 1.15 166.3 -1.23 -0.17 20.5 77 15 7 8 13 7 4 0   20 1.38 1.43 171.1 0.57 0.14 11.8 79 8 10 11 27 6 0 0   21 1.38 1.47 184.2 -0.74 -0.16 19.1 79 13 9 10 16 5 1 1   22 1.26 1.48 186.1 0.61 0.36 9.7 76 7 3 9 35 11 0 0   23 1.19 1.34 185.7 0.06 0.18 12.2 75 10 5 9 26 11 2 0   24 1.27 1.38 200.4 0.26 0.20 11.8 75 10 5 9 28 10 3 1   25 1.32 1.27 194.9 0.01 0.16 13.0 77 11 6 10 26 11 2 0   26 1.21 1.34 208.5 0.52 0.33 10.2 77 9 4 11 37 11 0 0   27 1.27 1.36 220.8 0.76 0.37 8.1 75 8 3 12 40 16 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.