PDBsum entry 9j0f Go to PDB code:  Tunnel analysis for: 9j0f calculated with MOLE 2.0 PDB id 9j0f Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.90 2.27 17.1 -2.01 -0.07 25.5 77 5 2 1 2 3 0 0   2 1.69 2.08 35.7 -0.63 -0.36 11.2 76 2 1 3 3 3 2 3   3 1.12 1.12 49.0 0.04 0.20 16.5 83 9 1 2 10 1 0 0   4 1.12 1.12 60.1 -0.63 -0.01 20.2 88 7 4 4 8 0 0 0   5 1.14 1.14 65.5 -0.20 0.03 16.7 84 9 2 3 10 2 0 0   6 1.37 1.37 35.1 -1.07 -0.09 14.3 82 4 2 5 4 3 0 1  NAI 401 R Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.