PDBsum entry 9ixx Go to PDB code:  Tunnel analysis for: 9ixx calculated with MOLE 2.0 PDB id 9ixx Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.19 1.19 45.8 -0.07 0.04 12.3 77 3 2 3 8 4 0 0  LTD 401 R 2 1.19 1.18 50.4 -0.08 -0.01 11.4 76 4 2 2 8 3 0 0  LTD 401 R 3 1.20 1.20 55.5 0.67 0.29 6.4 81 2 1 4 11 4 0 0  LTD 401 R 4 1.16 1.29 16.1 1.59 0.22 1.6 70 0 0 0 5 2 0 0   5 1.16 1.52 19.0 2.37 0.62 2.0 75 0 1 0 7 1 1 0   6 1.26 1.46 19.0 0.00 0.34 3.1 62 0 1 0 3 3 0 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.