 |
PDBsum entry 9iv6
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 9iv6 calculated with MOLE 2.0
|
PDB id
|
|
|
|
9iv6
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
9 pores,
coloured by radius |
 |
9 pores,
coloured by radius
|
9 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.21 |
2.27 |
25.5 |
-0.68 |
0.40 |
9.0 |
71 |
 |
2 |
0 |
1 |
3 |
6 |
1 |
0 |
 |
|
 |
 |
2 |
 |
1.30 |
1.47 |
28.0 |
-0.90 |
-0.37 |
12.0 |
90 |
4 |
1 |
5 |
2 |
2 |
0 |
0 |
|
 |
3 |
 |
1.18 |
2.25 |
35.6 |
-1.57 |
-0.01 |
21.0 |
84 |
6 |
1 |
1 |
3 |
2 |
0 |
0 |
|
 |
4 |
 |
1.23 |
2.24 |
53.6 |
-1.44 |
-0.23 |
14.3 |
85 |
5 |
2 |
5 |
2 |
3 |
0 |
0 |
|
 |
5 |
 |
2.05 |
2.08 |
55.4 |
-1.32 |
-0.23 |
15.0 |
89 |
8 |
2 |
5 |
4 |
2 |
0 |
0 |
|
 |
6 |
 |
1.15 |
2.23 |
102.0 |
-0.27 |
0.16 |
11.3 |
72 |
4 |
3 |
5 |
9 |
6 |
1 |
1 |
|
 |
7 |
 |
2.34 |
3.81 |
104.0 |
-0.30 |
0.13 |
12.1 |
76 |
7 |
3 |
5 |
11 |
5 |
1 |
1 |
|
 |
8 |
 |
1.14 |
1.23 |
113.7 |
-1.24 |
-0.38 |
13.9 |
84 |
8 |
5 |
10 |
6 |
5 |
1 |
3 |
|
 |
9 |
 |
1.99 |
2.06 |
117.1 |
-0.69 |
-0.07 |
11.2 |
79 |
4 |
3 |
7 |
10 |
5 |
1 |
1 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |