PDBsum entry 9itp Go to PDB code:  Tunnel analysis for: 9itp calculated with MOLE 2.0 PDB id 9itp Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.13 1.13 48.0 1.21 0.04 3.9 81 0 2 0 15 3 0 0   2 1.82 1.93 36.6 1.20 0.58 8.2 94 5 0 7 21 0 0 0   3 1.73 1.88 37.9 3.83 1.27 0.2 77 0 0 0 30 0 0 0   4 1.50 1.52 21.5 1.02 0.01 4.6 87 0 1 2 8 0 0 0   5 1.47 2.20 24.9 1.11 0.11 5.7 86 1 1 2 8 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.