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PDBsum entry 9itb

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Pore analysis for: 9itb calculated with MOLE 2.0 PDB id
9itb
Pores calculated on whole structure Pores calculated excluding ligands

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14 pores, coloured by radius 24 pores, coloured by radius 24 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.16 2.41 29.4 -1.54 -0.53 21.3 86 4 5 4 2 1 0 1  
2 1.25 1.25 30.4 -2.14 -0.40 28.4 85 6 3 3 3 0 0 0  
3 1.80 2.00 43.3 -0.88 -0.34 14.6 90 4 2 4 4 1 0 0  
4 2.68 3.98 45.0 -1.46 -0.42 14.5 85 6 3 7 4 1 0 0  
5 1.22 1.21 50.7 -1.17 -0.35 15.2 86 6 3 7 6 1 0 0  
6 1.34 2.10 63.5 -0.40 -0.16 11.1 91 3 2 4 9 1 0 0  
7 1.32 2.05 64.6 -0.38 -0.18 11.2 86 6 2 3 6 2 0 0  
8 0.98 1.56 64.5 1.46 0.50 2.2 82 1 0 2 8 3 0 1  
9 1.98 1.98 77.3 -1.33 -0.31 18.2 93 5 2 6 6 1 0 0  
10 2.22 2.24 78.3 -1.30 -0.34 18.4 88 8 2 5 3 2 0 0  
11 1.04 1.54 86.8 0.39 0.14 9.3 88 1 2 5 11 2 0 1  
12 1.02 1.52 87.9 0.55 0.15 8.8 83 4 2 4 8 3 0 1  
13 1.73 1.85 96.1 -1.46 -0.42 19.3 87 6 9 6 6 3 1 0  
14 1.31 1.98 101.9 -0.77 -0.18 13.8 90 7 1 5 8 2 0 0  
15 1.19 1.25 115.2 -1.56 -0.47 18.2 85 8 5 10 6 5 1 3  
16 2.13 2.07 126.2 -1.73 -0.50 22.1 86 10 10 8 3 4 1 0  
17 1.29 1.48 137.1 -0.69 -0.17 16.2 84 6 8 6 10 5 1 1  
18 1.18 1.59 142.2 -1.76 -0.52 20.7 86 8 12 12 6 5 2 3  
19 1.49 1.68 165.7 -1.67 -0.47 20.9 86 10 13 8 6 4 1 0  
20 1.25 1.85 28.4 1.13 0.53 4.0 81 1 0 1 11 4 0 0  NKP 401 R
21 1.38 1.82 33.2 -1.52 0.11 18.0 62 4 1 2 1 9 0 2  NKP 401 R
22 1.96 2.25 37.9 0.35 0.67 4.2 71 2 0 2 7 9 0 0  NKP 401 R
23 1.14 1.42 38.4 0.44 0.54 2.4 78 0 1 2 9 6 1 0  NKP 401 R
24 1.11 1.39 45.8 0.09 0.64 3.7 71 2 1 2 8 10 1 0  NKP 401 R

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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