 |
PDBsum entry 9ipr
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 9ipr calculated with  MOLE 2.0
|
PDB id
|
|
|
|
9ipr
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnels calculated on whole structure |
|
Tunnels calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
4 tunnels,
coloured by tunnel radius |
|
7 tunnels,
coloured by
tunnel radius
|
7 tunnels,
coloured as in
list below
|
|
|
|
|
|
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.53 |
1.58 |
22.0 |
0.72 |
0.43 |
6.3 |
92 |
|
1 |
0 |
3 |
7 |
0 |
0 |
0 |
|
PBF 13 C
|
 |
|
2 |
 |
1.29 |
1.34 |
25.0 |
0.34 |
0.20 |
5.9 |
85 |
1 |
0 |
3 |
7 |
0 |
0 |
0 |
PBF 13 G
|
|
3 |
 |
1.54 |
1.58 |
28.4 |
-0.21 |
0.01 |
7.1 |
86 |
2 |
0 |
3 |
8 |
0 |
0 |
0 |
PBF 13 C
|
|
4 |
 |
1.28 |
1.28 |
20.3 |
1.21 |
0.33 |
1.8 |
84 |
0 |
0 |
2 |
6 |
0 |
0 |
0 |
PBF 13 B
|
|
5 |
 |
1.21 |
2.00 |
16.6 |
-0.15 |
0.43 |
12.5 |
88 |
1 |
0 |
3 |
5 |
2 |
0 |
0 |
|
|
6 |
 |
1.19 |
1.33 |
18.9 |
1.36 |
0.46 |
2.9 |
87 |
1 |
0 |
2 |
9 |
0 |
0 |
0 |
PBF 13 F
|
 |
7 |
 |
1.25 |
2.74 |
15.9 |
-1.19 |
-0.16 |
28.0 |
87 |
3 |
3 |
0 |
4 |
0 |
0 |
1 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program