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PDBsum entry 9ipc

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 9ipc calculated with MOLE 2.0 PDB id
9ipc
Pores calculated on whole structure Pores calculated excluding ligands

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11 pores, coloured by radius 11 pores, coloured by radius 11 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.42 2.37 27.7 1.56 0.50 4.4 74 1 1 0 10 3 0 2  
2 1.32 1.55 35.6 -0.41 -0.40 5.4 82 0 2 4 1 0 2 2  
3 2.04 2.39 37.2 2.65 0.84 0.9 77 0 0 1 18 3 0 0  
4 2.05 2.39 39.3 2.88 0.85 2.2 75 1 1 0 20 2 0 0  
5 2.32 3.48 45.1 -0.08 0.00 3.7 72 2 0 6 5 7 3 0  
6 1.98 1.98 72.6 -0.72 -0.15 9.7 78 3 4 6 6 5 2 0  
7 1.13 1.73 99.7 0.39 0.16 10.0 71 4 5 3 11 6 2 2  
8 1.71 2.79 104.7 1.15 0.28 5.3 82 3 3 3 28 5 0 0  
9 2.41 2.57 107.2 -1.51 -0.50 14.9 84 4 5 12 6 4 2 0  
10 2.04 2.08 125.7 -0.92 -0.28 13.6 75 5 7 6 9 7 4 0  
11 1.39 1.60 139.9 -1.32 -0.50 15.0 80 5 11 12 6 5 5 2  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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