PDBsum entry 9ik9

Pore analysis for: 9ik9 calculated with

MOLE 2.0

PDB id

9ik9

Pores calculated on whole structure

Pores calculated excluding ligands

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15 pores, coloured by radius

12 pores, coloured by radius

12 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.21

1.26

30.9

0.04

-0.03

14.6

77

3

2

1

5

0

0

1

2

1.35

1.35

31.1

-0.08

-0.05

15.1

81

3

1

2

5

0

0

1

3

1.41

1.76

32.9

-0.56

-0.33

9.2

86

1

2

6

7

1

0

0

4J2 1 F DCY 2 F DTY 3 F DTR 4 F DVA 6 F DCY 7 F
ALO 8 F NH2 9 F

4

2.09

2.09

33.7

-0.82

-0.24

10.3

91

4

2

5

4

1

1

0

5

2.09

2.09

33.8

-1.25

-0.18

14.8

83

4

2

4

2

3

0

0

6

1.09

2.80

34.8

1.65

0.28

4.1

87

1

1

1

9

1

0

0

7

1.56

1.66

69.1

-1.11

-0.32

11.8

88

2

4

7

4

4

1

0

8

2.05

3.14

71.3

-1.24

-0.17

18.8

85

9

4

4

3

2

1

0

9

1.46

2.39

88.6

-0.86

-0.04

17.6

82

4

5

5

10

3

1

1

10

1.58

1.66

101.5

-1.17

-0.41

15.0

88

9

4

6

3

2

1

0

11

1.21

1.25

223.6

-0.85

-0.15

16.9

82

11

11

9

14

5

0

2

12

1.27

3.36

243.1

-1.13

-0.38

16.2

87

18

12

16

14

4

1

2

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.